| Presentation
file |
introducer |
date |
paper |
video |
|
Chi-Hung Tsai, Bo-Juen
Chen, Chen-hsiung Chan, Hsuan-Liang Liu and Cheng-Yan Kao, "Improving
disulfide connectivity prediction with sequential distance between oxidized
cysteines", Bioinformatics, Vol. 21 no. 24 2005, pages 4416–4419 |
鐘緯駿 |
Jan. 6 |
 |
 |
|
Esko Ukkonen, "Algorithm for Approximate String Matching", Information and
Control, Vol. 64, Nos. 1-3, January/ February/ March 1985 |
安興彥 |
Jan. 6 |
|
|
|
Maxime Crochemore, Costas S. Iliopoulos,and M. Sohel Rahman, "Optimal prefix
and suffix queries on texts", Information Processing Letters 108 (2008)
320–325 |
彭永興 |
Jan. 13 |
|
|
|
Kang-Ping Wang, Lan Huang, Chun-Guang Zhou,and Wei Pang, "PARTICLE SWARM
OPTIMIZATION FOR TRAVELING SALESMAN PROBLEM", Proceedings of the Second
International Conference on Machine Learning and Cybernetics,'Xi'an, 2-5
November 2003 |
翁祥益 |
Jan. 13 |
|
|
|
Shakhar
Smorodinsky."A note on the online First-Fit algorithm for coloring k-inductive
graphs".Information Processing Letters 109 (2008) 44–45 |
林志穎 |
Jan. 20 |
|
|
|
|
顏欣偉 |
Jan. 20 |
|
|
|
Hans-Peter
Lenhof and Michiel Smid . "Using Persistent Data Structures for Adding
Range Restrictions to Searching Problems"
RAIRO Theoretical Informatics and Applications, Vol. 28, pp. 25-49,
1994
|
曾球庭 |
Feb. 3 |
|
N/A |
|
Yu-Ching
Chen.1 Yeong-Shin Lin,2 Chih-Jen Lin,3 and Jenn-Kang Hwang1,2
. "Prediction
of the Bonding States of Cysteines Using the Support
Vector Machines Based on Multiple FeatureVectors and Cysteine State
Sequences"PROTEINS:
Structure, Function, and Bioinformatics 55:1036–1042 (2004) |
鐘緯駿 |
Feb. 3 |
|
N/A |
|
Banghe
Li , Yuefeng Shen , Bo Li. "A
new algorithm for computing the minimum Hausdorff distance between
two point sets on a line under translation"Information
Processing Letters 106 (2008) 52–58 |
陳紘昕 |
Feb. 3 |
|
N/A |
|
Christina
Leslie , Eleazar Eskin , Adiel Cohen , Jason Weston and William Stafford Nobley .
" Mismatch string kernels for discriminative protein classification".Bioinformatics
Advance Access published January 22, 2004
|
何秋誼 |
Feb. 10 |
|
|
|
Guillaume
Blin, Guillaume Fertin,Danny Hermelin, and Stèphane
Vialette,"Fixed-Parameter
Algorithms for Protein Similarity Search Under mRNA Structure
Constraints".31st
International Workshop, WG 2005, Metz, France, June 23-25, 2005
|
陳俊仁 |
Feb. 17
|
|
|
|
M.
Crochemore & W. Rytter. "Rapid
Identification of Repeated Patterns in Strings, Arrays and Trees (Karp,
Miller and Rosenberg, 1972)"
Efficient Algorithms on Texts, 1997– Section 8.1
KMR Algorithm
|
安興彥 |
Mar. 4
|
N/A
|
|
|
|
顏欣偉 |
Mar. 4 |
|
|
|
I.
Krasikov, S.D. Noble."Finding next-to-shortest paths in a
graph"Information Processing Letters 92 (2004) 117–119 |
劉洙愷 |
Mar. 4 |
|
|
|
I.
Krasikov, S.D. Noble."Finding next-to-shortest paths in a
graph"Information Processing Letters 92 (2004) 117–119 |
劉洙愷 |
Mar. 11 |
|
|
|
Maxime
Crochemore, Costas S. Iliopoulos, Marcin Kubica, M. Sohel Rahman and Tomasz
Waleń,"Improved
algorithms for the range next value problem and applications",Symposium
on Theoretical Aspects of Computer Science (STAC) 2008 Bordeaux, France, pp.
205-216, 2008. |
彭永興 |
Mar. 17 |
|
|
|
|
鐘緯駿 |
Mar. 17 |
|
|
|
Enrique
Romero and Josep María Sopena,"Performing
Feature Selection With Multilayer Perceptrons",IEEE
Transaction on Neural Networks,Vol. 19, No. 3, March 2008 |
何秋誼 |
Mar. 24 |
|
|
|
Chih-Huai
Cheng, Hsiao-Fei Liu, Kun-Mao Chao,"Optimal
algorithms for the average-constrained maximum-sum segment problem",Information
Processing Letters 109 (2009) 171–174 |
林志穎 |
Mar. 24 |
|
|
|
Chih-Huai
Cheng, Hsiao-Fei Liu, Kun-Mao Chao,"Optimal
algorithms for the average-constrained maximum-sum segment problem",Information
Processing Letters 109 (2009) 171–174 |
林志穎 |
Apr. 1 |
|
|
|
C.-F.
Huang, J. Kaur, A. Maguitman and L. M. Rocha,"Agent-Based
Model of Genotype Editing",Evolutionary Computation,Vol. 15, No.
3, pp. 253-289, 2007 |
安興彥 |
Apr. 1 |
|
|
|
Shisheng
Li, Guangzhong Sun, Guoliang Chen,"Improved
algorithm for finding next-to-shortest paths",Information
Processing Letters 92(2006) 192–194 |
劉洙愷 |
Apr. 8 |
|
|
|
Yushan
Zhu,"Mixed-Integer
Linear Programming Algorithm for a Computational Protein Design
Problem", Ind.
Eng. Chem. Res. 2007, 46, 839-845
|
陳俊仁 |
Apr. 8 |
|
|
|
P.Fernandez-Blanco,
D.Bodas-Sagi, F.Soltero, J.I.Hdalgo,"Technical Market Indicators
Optimization
using Evolutionary Algorithm",Proceedings of the
2008 GECCO conference companion on Genetic and
evolutionary computation, Atlanta, USA, July 12-16, 2008
|
陳紘昕 |
Apr. 8 |
|
|
|
Mira
Gonen , Yuval Shavitt,"A
theta(logn)-approximation
for the set cover problem with set ownership",Information
Processing Letters 109 (2009) 183–186 |
林志穎 |
Apr. 22 |
|
|
|
Depei
Bao, Zehong Yang,"Intelligent
stock trading system by turning point confirmingand probabilistic reasoning",Expert
Systems with Applications 34 (2008) 620–627
|
陳紘昕 |
Apr. 22 |
|
|
|
Sebastian
Deorowicz, "An
Algorithm for Solving the Longest Increasing Circular Subsequence Problem",
Information Processing Letters, Vol. 109, pp. 630-634, 2009 |
曾球庭 |
Apr. 29 |
|
|
|
Jianlin
Cheng and Pierre Baldi, "A
machine learning information retrieval approach to protein fold recognition",
Bioinformatics,
vol. 22, no. 12, pp. 1456-1463, 2006 |
陳俊仁 |
Apr. 29 |
|
|
|
Devi
Parikh and Robi Polikar,"An
Ensemble-Based Incremental Learning Approach to Data Fusion",IEEE
TRANSACTIONS ON SYSTEMS, MAN, AND CYBERNETICS—PART B: CYBERNETICS, VOL.
37,
NO.
2, APRIL 2007 |
何秋誼 |
May 6 |
|
|
|
Jorgen
Bang-Jensen Gegory Gutin,"Digraphs
Theory, Algorithms and Applications",Flows
in Networks |
劉洙愷 |
May 6 |
|
|
|
Esther
M. Arkin, Sang Won Baeb, Alon Efratc, Kazuya Okamotod, Joseph S.B. Mitchell
,Valentin Polishchuk,"Geometric stable roommates",Information
Processing Leters 109 (2009) 219–224 |
林志穎 |
May 19 |
|
|
|
Sitao
Wu and Yang Zhang,"LOMETS:
A local meta-threading-server for protein structure prediction",Nucleic
Acids Research, 2007, Vol. 35, No. 10
|
陳俊仁 |
May 19 |
|
|
|
Sheng-Hsun
Hsu, JJ Po-An Hsieh, Ting-Chih Chih,Kuei-Chu Hsu,"A
two-stage architecture for stock price forecasting
by integrating self-organizing map and
support vector regression ",Expert
Systems with Applications, Vol36(2009), PP. 7947-7951
|
陳紘昕 |
May 19 |
|
|
|
Dong
K. Kim, Junha
Jo and Heejin Park,"A
Fast Algorithm for Constructing Suffix Arrays for Fixed-Size Alphabets",Lecture
Notes in Computer Science, Vol. 3059,pp. 301-314, 2004 |
安興彥 |
May 26 |
|
|
|
Maw-Shang
Chang, Hsiao-Han Chung, Chuang-Chieh Lin,"An
improved algorithm for the red-blue hitting set problem with the consecutive
ones property",The
26th Workshop on Combinatorial Mathematics and Computation Theory,pp.
15–20, Chiayi, Taiwan, 2009. |
劉洙愷 |
May 26 |
|
|
|
Yen-Lin
Huang, Cheng-Chen Huang, Chuan-Yi Tang and Chin-Lung Lu,"An Improved Algorithm for Sorting by Block-Interchanges Based on Permutation Groups",The 26 th Workshop on Combinatorial Mathematics and
Computation Theory, PP. 9-14, Chiayi, Taiwan, Apr. 24-25, 2009 |
陳紘昕 |
June 2 |
|
|
|
J.
J. Liu, Y. L. Wang, C. J. Hsu, and S. F. Yu,"The
Composition Problem",The
26th Workshop on Combinatorial Mathematics and Computation Theory |
曾球庭 |
June 9 |
|
|
|
Chia-Wei
Lu, Chun-Yuan Lin, Chuan-Yi Tang, Wing-Kai Hon,"An algorithm for the
multiple patterns approximate string matching problem"The 26th Workshop
on Combinatorial Mathematics and Computation Theory |
林志穎 |
June 9 |
|
|
|
Adam
Zemla, "LGA:
a method for finding 3D similarities in protein structures", Nucleic
Acids Research, 2003, Vol. 31, No. 13 |
陳俊仁 |
June 23 |
|
|
|
Eunsang
Kim, Kunsoo Park,"Improving
multikey Quicksort for sorting strings with many equal elements",Information
Processing Letters 109 (2009) 454–459 |
劉洙愷 |
June 23 |
|
|
|
Jar-Long
Wang, Shu-Hui Chan,"Trading rule discovery in the US stock market: An empirical study",Expert System with Applications, Vol36(2009), pp. 5450-5455 |
陳紘昕 |
June 23 |
|
|
|
Ludmila
I. Kuncheva,"Fuzzy
Versus Nonfuzzy in Combining Classifiers Designed by Boosting",IEEE
TRANSACTIONS ON FUZZY SYSTEMS,VOL. 11, NO. 6, Dec. 2003 |
何秋誼 |
June 30 |
|
N/A |
|
Pier
Luigi Martelli, Piero Fariselli and Rita Casadio,"Prediction
of disulfide-bonded cysteines in proteomes with a hidden neural network",Proteomics
2004, 4, 1665–1671
DOI 10.1002/pmic.200300745 |
林志穎 |
June 30 |
|
|
|
Julian
Lee, Seung-Yeon Kim, Jooyoung Lee, "Protein
structure prediction based on fragment assembly and parameter optimization",
Biophysical
Chemistry 115 (2005) 209–
214
|
陳俊仁 |
July 14 |
|
|
|
Tun-Jen
Chang, Sang-Chin Yang, Kuang-Jung Chang,"Portfolio optimization problems in different
risk measures using genetic algorithm",Expert Systems with Applications, Vol36(2009), pp. 10529-10537
|
陳紘昕 |
July 14 |
|
|
|
Liuling Dai,
"An
Aggressive Algorithm for Multiple String Matching", Information
Processing Letters, Vol. 109, pp. 553–559, 2009
|
曾球庭 |
July 21 |
|
|
|
Jianlin
Cheng, Hiroto Saigo, and Pierre Baldi,"Large-Scale Prediction of
Disulphide Bridges Using Kernel Methods, Two-Dimensional Recursive Neural
Networks, and Weighted Graph Matching",Structure, Function, and
Bioinformatics 62:617–629 (2006) |
林志穎 |
July 21 |
|
|
|
Hamed Soleimani, Hamid Reza Golmakani, Mohammad
Hossein Salimi,"Markowitz-based portfolio selection with minimum transaction lots, cardinality
constraints and regarding sector capitalization using genetic algorithm",Expert Systems with Applications, Vol 36(2009), pp. 5058-5063 |
陳紘昕 |
July 28 |
|
|
|
Gabriela
Minetti, Enrique Alba, Gabriel Luque,"Seeding
strategies and recombination operators for solving the DNA
fragment
assembly problem", Information
Processing Letters 108 (2008) 94–100 |
劉洙愷 |
July 28 |
|
|
|
Rotem
Rubinstein and Andras Fiser,"Predicting
disulfide bond connectivity in proteins by correlated mutations analysis",10.1093/bioinformatics/btm637
Vol.
24 No. 4. 2008, pages 498–504 |
林志穎 |
Aug. 4 |
|
|
|
Ludmila
I. Kuncheva and Christopher J. Whitaker,"Measures
of Diversity in Classifier Ensembles and Their Relationship with the
Ensemble Accuracy",Machine
Learning,VOL. 51, pp. 181-207, 2003 |
何秋誼 |
Aug. 4 |
|
|
|
Julian
Lee, Seung-Yeon Kim, Keehyoung Joo,Ilsoo Kim, and Jooyoung Lee, "Prediction
of Protein Tertiary Structure Using PROFESY, a Novel Method Based on
Fragment Assembly and Conformational Space Annealing", PROTEINS:
Structure, Function, and Bioinformatics 56:704–714(2004) |
陳俊仁 |
Aug. 10 |
|
|
|
Jiah-Shing Chena,
Jia-Li Houb, Shih-Min Wua, Ya-Wen Chang-Chiena,"Constructing investment strategy portfolios
by combination genetic algorithms",Expert Systems with Applications, Vol. 36(2009), pp. 3824-3828 |
陳紘昕 |
Aug. 10 |
|
|
|
Chih-Hao Lu,Yu-Ching Chen,Chin-Sheng Yu,and
Jenn-Kang Hwang,"Predicting
Disulfide Connectivity Patterns",Structure,
Function, and Bioinformatics 67:262–270 (2007) |
林志穎 |
Aug. 28 |
|
|
|
J.
Garcia-Nieto , E. Alba, L. Jourdan, E.Talbi,"Sensitivity
and specificity based multiobjective approach for feature selection",Information
Processing Letters 109 (2009) 887–896 |
劉洙愷 |
Aug. 28 |
|
|
|
Ting-Lan
Chiu and Richard A Goldstein, "Optimizing
energy potentials for success in protein tertiary structure prediction",
Folding
and Design
Volume
3, Issue 3, June 1998, Pages 223-228 |
陳俊仁 |
Sept. 1 |
|
|
|
John Moody, Matthew Saffell,"Learn to trade via direct reinforcement",IEEE Transactions on Neural Networks, Vol. 12, No. 4, July 2001, PP.
875-889 |
陳紘昕 |
Sept. 1 |
|
|
|
Alberto
Apostolico, Laxmi Parida, Simona E. Rombo, "Motif
Patterns in 2D", Theoretical
Computer Science Vol. 390, pp. 40–55, 2008 |
曾球庭 |
Sept. 8 |
|
|
|
ALESSIO
CERONI, PAOLO FRASCONI
, ANDREA PASSERINI AND ALESSANDRO VULLO,'Predicting
the Disulfide Bonding State of Cysteines with Combinations of Kernel
Machines",Journal
of VLSI Signal Processing 35, 287–295, 2003 |
林志穎 |
Sept. 8 |
|
|
|
Xiaojing
Yu, Jianping Cao, Yudong Cai,Tieliu Shi, Yixue Li.,"Predicting
rRNA-,
RNA-, and
DNA-binding
proteins from primary structure with
support
vector machines",Journal of Theoretical Biology 240 (2006)
175–184 |
劉洙愷 |
Sept. 8 |
|
|
|
Ravi
Gupta, Ankush Mittal, and Kuldip Singh,"A
Time-Series-Based Feature Extraction Approach for Prediction of Protein
Structural Class",EURASIP Journal on Bioinformatics and Systems
Biology,VOL. 2008 |
何秋誼 |
Sept. 15 |
|
|
|
Jean-Yves
Potvin, Patrick Soriano, Maxime Vallee,"Generating trading rules on the stock markets
with genetic programming",Computers & Operations Research, Vol. 31(2004), PP. 1033-1047 |
陳紘昕 |
Sept. 15 |
|
|
|
|
陳俊仁 |
Sept. 29 |
|
|
|
Jiang-Ning
Song, Ming-Lei Wang, Wei-Jiang Li and Wen-Bo Xu,"Prediction
of the disulfide-bonding state of cysteines in proteins based on dipeptide
composition",Biochemical and Biophysical Research Communications
318 (2004) 142–147 |
林志穎 |
Sept. 29 |
|
|
|
Ran
Bi, Yanhong Zhou, Feng Lu,Weiqiang Wang,"Predicting
Gene Ontology functions based on support vector machines and statistical
significance
estimation",Neurocomputing
70 (2007) 718–725 |
劉洙愷 |
Sept. 29 |
|
|
|
Joseph
S. B. Mitchell,"A
Geometric Shortest Path Problem with Application to Computing a Longest
Common Subsequence in Run-Length Encoded Strings",Technical
Report, Dept.
of Applied Mathematics, SUNY Stony Brook, pp. 1-3, 1997. |
安興彥 |
Oct. 6 |
|
|
Shingo Mabu, Kotaro
Hirasawa, Jinglu Hu,"A Graph-Based Evolutionary Algorithm:
Genetic Network Programming(GNP) and Its Extension Using Reinforcement Learning",Evolutionary Computation 15(3), pp. 369-398 |
陳紘昕 |
Oct. 6 |
|
|
|
Chao-Chun
Chuang, Chun-Yin Chen, Jinn-Moon Yang, Ping-Chiang Lyu, and Jenn-Kang Hwang,
"Relationship
Between Protein Structures and Disulfide-Bonding
Patterns", PROTEINS:
Structure, Function, and Bioinformatics 53:1–5 (2003) |
陳俊仁 |
Oct. 13 |
|
|
|
M.H.
Mucchielli-Giorgi, S. Hazout, and P. Tufféry, "Predicting
the Disulfide Bonding State of Cysteines Using Protein Descriptors",
PROTEINS:
Structure, Function, and Genetics 46:243–249 (2002) |
林志穎 |
Oct. 13 |
|
|
|
Pufeng
Du, Tao He, Yanda Li,"Prediction
of C-to-U RNA editing sites in higher plant
mitochondria
using only nucleotide sequence features",Biochemical
and Biophysical Research Communications 358 (2007) 336–341 |
劉洙愷 |
Oct. 13 |
|
|
|
Yan
Chen, Shingo Mabu, Etsushi Ohkawa, Kaoru Shimada, Kotaro Hirasawa,"A portfolio optimization model using Genetic
Network Programming with Control nodes",Expert Systems with Application 36 (2009), p.p. 10735-10745 |
陳紘昕 |
Oct. 28 |
|
|
|
Miklos
Bona, Ryan Flynn, "The
average number of block interchanges needed to sort a permutation and
a recent result of Stanley", Information Processing Letters 109
(2009) 927–931 |
陳愷瑜 |
Oct. 28 |
|
|
|
Miklos
Bona, Ryan Flynn, "The
average number of block interchanges needed to sort a permutation and
a recent result of Stanley", Information Processing Letters 109
(2009) 927–931 |
陳愷瑜 |
Nov. 3 |
|
|
|
Joong
Chae Na, Dong Kyue Kim and Jeong Seop Sim, "Finding
the longest common nonsuperstring in linear time", Information
Processing Letters, Vol. 109, pp. 1066-1070, 2009 |
林東建 |
Nov. 3 |
|
|
|
T.W.
Barlow, W.G. Richards, "Reduced
molecular representations and their role in protein structure prediction",
Journal
of Molecular Structure (Theochem) 398-399 (1997) |
陳俊仁 |
Nov. 10 |
|
|
|
Reiji
Teramoto, Mikio Aoki, Toru Kimura, Masaharu Kanaoka, "Prediction
of siRNA functionality using generalized string kernel and support vector
machine", FEBS(Federation
of European Biochemical Societies ) Letters 579 (2005) 2878–2882 |
劉洙愷 |
Nov. 10 |
|
|
|
Samad
Jahandideh, Somayyeh Hoseini, Mina Jahandideh, Afsaneh
Hoseini, Ali Salehzadeh Yazdi, "Analysis
of factors that induce cysteine bonding state", Computers in
Biology and Medicine 39 (2009) 332 - 339 |
林志穎 |
Nov. 17 |
|
|
|
Ming-Chi Lee,
"Using support vector machine with a
hybrid feature selection method to the stock trend prediction", Expert Systems with Applications 36 (2009), pp. 10896-10904 |
陳紘昕 |
Nov. 17 |
|
|
|
Peter
Brass, Hyeon-Suk Na, "Finding
the maximum bounded intersection of k out of n halfplanes", Information
Processing Letters 110 (2010) 113–115 |
王重傑 |
Nov. 17 |
|
|
|
Daniel
Andersson,
"Hashiwokakero
is NP-complete", Information Processing Letters 109 (2009)
1145–1146 |
陳愷瑜 |
Nov. 24 |
|
|
|
Bang
Ye Wu, "An
optimal algorithm for the maximum-density path in a tree",
Information
Processing Letters 109(2009) 975-979 |
周孝岷 |
Nov. 24 |
|
|
|
Bang
Ye Wu, "An
optimal algorithm for the maximum-density path in a tree",
Information
Processing Letters 109(2009) 975-979 |
周孝岷 |
Dec. 1 |
|
|
|
Na
Liu and Tianming Wang,
"A
method for rapid similarity analysis of RNA secondary structures",
BMC Bioinformatics 2006, 7:493 |
何秋誼 |
Dec. 1 |
|
|
|
Marc
Morig, Dieter Rautenbach, Michiel Smid, and Jan Tusch, "An
Ω(n
logn)
lower
bound for computing the sum
of
even-ranked elements", Information Processing Letters, Vol. 109,
pp. 955–956, 2009 |
林東建 |
Dec. 1 |
|
|
|
C.Z.
Cai, W.L. Wang, L.Z. Sun, Y.Z. Chen, "Protein
function classification via support vector machine
approach", Mathematical
Biosciences 185 (2003) 111-122 |
劉洙愷 |
Dec. 8 |
|
|
|
Hans-Peter
Lenhof
and Michiel Smid, "Using
Persistent Data Structures for Adding Range Restrictions to Searching
Problems", RAIRO Theoretical Informatics and Applications, Vol.
28, pp. 25-49, 1994 |
曾球庭 |
Dec. 8 |
|
|
|
J.C.
Calvo, J. Ortega, M. Anguita, J.M. Urquiza,and J.P. Florido, "Protein
Structure Prediction by Evolutionary Multi-objective Optimization: Search
Space Reduction by Using Rotamers", IWANN
2009, Part I, LNCS 5517, pp. 861–868, 2009.
|
陳俊仁 |
Dec. 22 |
|
|
|
Qinghua
Wen, Zehong Yang, Yixu Song, Peifa Jia, "Automatic stock decision support system
based on box theory and SVM algorithm", Expert Systems with Applications 37 (2010), pp. 1015-1022
|
陳肱昕 |
Dec. 22 |
|
|
|
Peter
Brass, Hyeon-Suk Na, "Finding
the maximum bounded intersection of k out of n halfplanes", Information
Processing Letters 110 (2010) 113–115
|
王重傑 |
Dec. 29 |
|
|
|
Leonid
Libkin, Cristina Sirangelo, "Disjoint
pattern matching and implication in string", Information
Processong Letters 110 (2010) 142 - 147
|
周孝岷 |
Dec. 29 |
|
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|
|
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