Bioinformatics and Computation

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2016年

Presentation file introducer date paper video
Philip Bille. "A survey on tree edit distance and related problems". Theoretical Computer Science, vol 337, Issues 1-3, pp. 217-239(2005) 邱宣宗 Jan. 05
Md.MahbubulHasan, A.S.M.ShohidullIslam, Mohammad Saifur Rahman, M.SohelRahman. "Order preserving pattern matching revisited". Pattern Recognition Letters Volume 55, pp.15-21(2014) 洪書凱 Jan. 05
Koji Hakata, Hiroshi Imai. "The Longest Common Subsequence Problem for Small Alphabet Size Between Many Strings". Algorithms and Computation, Volume 650 of the series Lecture Notes in Computer Science, pp.469-478(2005) 黃士展 Jan. 05
M. E. M. T. Walter, Z. Dias, J. Meidanis. "A New Approach for Approximating the Transposition Distance". Seventh International Symposium on String Processing and Information Retrieval, pp. 199-208(2000) 林憲良 Jan. 12
Pei-Chann Chang, Chin-Yuan Fan, and Chen-Hao Liu. "Integrating a Piecewise Linear Representation Method and a Neural Network Model for Stock Trading Points Prediction". IEEE TRANSACTIONS ON SYSTEMS, MAN, AND CYBERNETICS—PART C: APPLICATIONS AND REVIEWS, pp. 80 – 92(2009) 蔡曜州 Jan. 12
. "同義詞的建造". 林必祥 Jan. 26
. "中文文件斷詞". 洪祥懷 Jan. 26
曾元顯 輔仁大學 圖書資訊學系. "Effectiveness Issues in Automatic Text Categorization". 中國圖書館學會會報, 第68期, pp.62-83(2002) 賴駿豪 Jan. 26
Md.MahbubulHasan, A.S.M.ShohidullIslam, MohammadSaifurRahman, M.SohelRahman. "Order preserving pattern matching revisited". Pattern Recognition Letters, volume 55, pp.15–21(2015) 洪書凱 Jan. 26
Gang Chen, Simon J. Puglisi, W. F. Smyth. "Fast and Practical Algorithms for Computing All the Runs in a String". Proceedings of the 18th Annual Symposium on Combinatorial Pattern Matching (CPM 2007), pp. 307-315(2007) 徐子強 Feb.01
MICHAEL G. MAIN, RICHARD J. LORRNTZ. "An O(n log n) Algorithm for Finding All Repetitions in a String". Journal of Algorithms Volume 5, Issue 3, pp. 422-432(1984) 黃士展 Feb.01
D.J. Guan, Chun-Yen Chou, Chiou-Wei Chen. "Computational complexity of similarity retrieval in a pictorial database". Information Processing Letters 75, pp.113-117(2000) 邱宣宗 Feb.16
Gad M. Landau, Michal Ziv-Ukelson. "On the Common Substring Alignment Problem". Journal of Algorithms 41, pp. 338-359(2001) 林必祥 Feb.23
MICHAEL G. MAIN, RICHARD J. LORRNTZ. "An O(nlogn) Algorithm for Finding All Repetitions in a String". Journal of Algorithms , Vol 5, Issue 3, pp. 422-432(1984) 黃士展 Feb.23
H. Bunke, J. Csirik. "An improved algorithm for computing the edit distance of run-length coded strings". Information Processing Letters volume 54, Issue 2, pp.93-96(1995) 林憲良 Mar.01
Navneet Dalal, Bill Triggs . "Histogram of Oriented Gradients for Human Detection". Proceedings of Computer Vision and Pattern Recognition(CVPR 2005), San Diego, CA, USA, pp. 886-893(2005) 傅威皓 Mar.01
Narao Nakatsu, Yahiko Kambayashi, Shuzo Yajima . "A Longest Common Subsequence Algorithm Suitable for Similar Text Strings". Acta Informatica 18, pp. 171-179 (1982) 洪祥懷 Mar.08
許雅芬 ,柯淑津. "新聞文件自動分類之研究". 賴駿豪 Mar.08
Narao Nakatsu, Yahiko Kambayashi, Shuzo Yajima . "A Longest Common Subsequence Algorithm Suitable for Similar Text Strings". Acta Informatica 18, pp.171 - 179 (1982) 洪祥懷 Mar.14
M. Crochemore, C.S. Iliopoulos, M. Kubicad, J. Radoszewski, W. Rytter, T. Waleń. "Extracting Powers and Periods in a Word from Its Runs". Theoretical Computer Science, Vol. 521, pp. 29 - 41 (2014) 徐子強 Mar.14
Jeff Stuckman, Guo-Qiang Zhang. "Mastermind is NP-Complete". INFOCOMP Journal of Computer Science, vol. 5, pp.25-28 (2006) 邱宣宗 Mar.14
Jon Hills, Jason Lines, Edgaras Baranauskas, James Mapp, Anthony Bagnall. "Classification of time series by shapelet transformation". Data Mining and Knowledge Discovery, Volume 28, Issue 4, pp 851-881 (2014) 洪書凱 Mar.29
M.S. WATERMAN, T.F. SMITH, W.A BEYER. "Some Biological Sequence Metrics". Advances in mathematics 20, pp.367-387(1976) 賴駿豪 Apr.12
OSAMU GOTOH. "An Improved Algorithm for Matching Biological Sequences ". Department of Biochemistry Saitama Cancer Center Research Institute Ina-machi , Saitama 362, Japan J. Mol. Biol. (1982) 162, 705-708 羅崇軒 Apr.12
Roman Kolpakov, Gregory Kucherov. "Finding Maximal Repetitions in a Word in Linear Time". Proceedings of the 40th Annual Symposium on Foundations of Computer Science (FOCS ‘99), pp.596 - 604(1999) 徐子強 Apr.12
T.F. Smith, M.S. Waterman. "Identification of Common Molecular Subsequences". J. Mol. Biol, Vol. 147, pp.195-197(1981) 洪祥懷 Apr.19
Michael S. Waterman. "Efficient Sequence Alignment Algorithms". Journal of Theoretical Biology, Vol.108, pp.333-337(1984) 邱宣宗 Apr.19
Webb Miller, Eugene W. Myers. "Sequence Comparison with Concave Weighting Functions". Bulletin of Mathematical Biology, Vol. 50, No. 2, pp. 97-120(1988) 林必祥 Apr.19
David Eppstein. " Sequence Comparison with Mixed Convex and Concave Costs". JOURNAL OF ALGORITHMS, Vol 11, pp.85-101 (1990) 林憲良 Apr.19
Alex Krizhevsky, Ilya Sutskever, Geoffrey E. Hinton. "ImageNet Classification with Deep Convolutional Neural Networks". Advances in Neural Information Processing Systems(2012) 傅威皓 Apr.26
Brijnesh J. Jain, Stephan Spiegel. "Time Series Classification in Dissimilarity Spaces". Proceedings 1st International Workshop on Advanced Analytics and Learning on Temporal Data AALTD 2015 洪書凱 Apr.26
John Larry Kelly, Jr.. "A New Interpretation of Information Rate". Bell System Technical Journal, 35(4), July 1956, pp. 917-926 黃士展 Apr.26
Muhammad Rashed Alam, M. Sohel Rahman. "The substring inclusion constraint longest common subsequence problem can be solved in quadratic time". Journal of Discrete Algorithms 17, pp. 67–73 (2012) 洪祥懷 May.03
N. Rajkumar, R. Vimal Karthick, M. Nathiya, K. Silambarasan. "Mining Association Rules in Big Data for E-healthcare Information System ". Research Journal of Applied Sciences, Engineering and Technology 8(8), pp. 1002-1008 (2014) 羅崇軒 May.03
David Silver, Aja Huang, Chris J. Maddison, Arthur Guez, Laurent Sifre, George van den Driessche, Julian Schrittwieser, Ioannis Antonoglou, Veda Panneershelvam, Marc Lanctot, Sander Dieleman, Dominik Grewe, John Nham, Nal Kalchbrenner, Ilya Sutskever, Timothy Lillicrap, Madeleine Leach, Koray Kavukcuoglu, Thore Graepel&Demis Hassabis. "Mastering the game of Go with deep neural networks and tree search ". Nature, Vol.529, pp. 484–489 (2016) 賴駿豪 May.03
René Peeters. "The maximum edge biclique problem is NP-complete". Discrete Applied Mathematics, Vol.131, pp. 651-654 (2003) 邱宣宗 May.10
Chih-En Kuo, Yue-Li Wang, Jia-Jie Liu, Ming-Tat Ko. "Resequencing a Set of Strings Based on a Target String". Algorithmica, Vol. 72, No. 2, pp. 430-449 (2015) 林必祥 May.18
Preeti Paranjape-Voditela, Umesh Deshpandeb. "A stock market portfolio recommender system based on association rule mining". Applied Soft Computing 13, pp. 1055–1063 (2013) 黃士展 May.18
Zoltan Banko, Janos Abonyi. "Mixed dissimilarity measure for piecewise linear approximation based time series applications". Expert Systems with Applications 42, pp. 7664–7675 (2015) 洪書凱 May.23
Hakan Bilen, Andrea Vedalai. "Weakly Supervised Deep Detection Networks". IEEE Conference on Computer Vision and Patter Recognization (2016) 傅威皓 May.23
1.Ruiqiang Li, Yingrui Li, Karsten Kristiansen and Jun Wang\n2.Ben Langmead, Cole Trapnell, Mihai Pop and Steven L Salzberg\n3.Heng Li and Richard Durbin. "1.SOAP: short oligonucleotide alignment program\n2.Ultrafast and memory-efficient alignment of short DNA sequences to the human genome\n3.Fast and accurate short read alignment with Burrows–Wheeler transform". 1.BIOINFORMATICS, Vol. 24, no. 5, pp. 713–714 (2008)\n2.Genome Biology, Volume 10, Issue 3, R25.1–R25.10(2009)\n3.BIOINFORMATICS, Vol. 25, no. 14, pp. 1754–1760 (2009) 羅崇軒 May.23
Milos Ilic, Petar Spalevic, Mladen Veinovic. "Suffix Tree Clustering - Data maining algorithm ". ERK'2014, Portorož, B:15-18 賴駿豪 May.23
Chiou-Ting Tseng, Chang-Biau Yang, Hsing-Yen Ann. "Efficient algorithms for the longest common subsequence problem with sequential substring constraints". Journal of Complexity 29, pp. 44–52 (2013) 洪祥懷 May.31
Patrick Schäfer. "scalable time series classification". Data Mining and Knowledge Discovery, 13 November, pp. 1-26 (2015) 洪書凱 June 14
Paola Alimonti, Viggo Kann. "Some APX-completeness results for cubic graphs". Theoretical Computer Science, Vol.237, pp.123-134 (2000) 邱宣宗 June 14
Gad M. Landau, Eugene Myers, Michal Ziv-Ukelson. "Two algorithms for LCS Consecutive Suffix Alignment". Journal of Computer and System Sciences, Vol. 73, No. 7, pp. 1095-1117 (2007) 林必祥 June 14
David Enke, Suraphan Thawornwong. "The use of data mining and neural networks for forecasting stock market returns". Expert Systems with Applications 29, pp.927–940 (2005) 黃士展 June 14
Wen Zhang, Taketoshi Yoshida, Xijin Tang. "A comparative study of TFIDF, LSI and multi-words for text classification". Expert Systems with Applications, Vol. 38, 2758–2765 (2011) 賴駿豪 June 21
Kaiming He, Xiangyu Zhang, Shaoqing Ren, Jian Sun. "Spatial Pyramid Pooling in Deep Convolutional Networks for Visual Recognition". IEEE Transactions on Pattern Analysis and Machine Intelligence, Vol. 37 (2015) 傅威皓 June 21
Shufen Kuo, George R. Cross . "An improved algorithm to find the length of the longest common subsequence of two strings". ACM SIGIR Forum, Volume 23, Issue 3-4, Pages 89-99, Spring 1989, New York, USA 羅崇軒 June 21
Laurent Hyafil, Ronald L. Rivest. "Constructing Optimal Binary Decision Trees is NP-Complete". Information Processing Letters, Vol. 5, pp.15-17 (1976) 邱宣宗 June 27
Sebastian Deorowicz. "Fast Algorithm for the Constrained Longest Common Subsequence Problem". Theoretical and Applied Informatics Vol. 19, no. 2, pp. 91–102 (2007) 洪祥懷 June 27
Y. Chai, V. Lempitsky, and A. Zisserman. "BiCoS: A Bi-level Co-Segmentation Method for Image Classification". IEEE International Conference on Computer Vision (2011) 傅威皓 Aug. 02
Kuo-Si Huang, Chang-Biau Yang, Kuo-Tsung Tseng, Hsing-Yen Ann, Yung-Hsing Peng. "Efficient algorithms for finding interleaving relationship between sequences". Information Processing Letters 105, pp. 188-193 (2008) 羅崇軒 Aug. 09
Chandradew Sharma, Kinjal Banerjee. "A study of correlations in the stock market". Physica A 432, pp.321-330 (2015) 黃士展 Aug. 09
Yusuke Ishida, Shunsuke Inenaga, Ayumi Shinohara, and Masayuki Takeda. "Fully Incremental LCS Computation". Proceedings of the 15th international conference on Fundamentals of Computation Theory, pp. 563-574 (2005) 林必祥 Aug. 16
Costas S. Iliopoulos, M. Sohel Rahman. "New Efficient Algorithms for LCS and Constrained LCS Problem". Information Processing Letters Vol. 106, pp. 13-18 (2008) 洪祥懷 Aug. 23
Kumar Vasimalla , C. Narasimham , B. Sujith. "Classification of Time Series Data by One Class Classifier using DTW-D". Procedia Computer Science 54, pp. 343-352 (2015) 洪書凱 Aug. 23
Uriel Feige. "Approximating Maximum Clique by Removing Subgraphs". SIAM J. DISCRETE MATH, Vol.18, No.2, pp. 219-225 (2004) 邱宣宗 Aug. 23
Sean S. Jung, Woojin Chang. "Clustering stocks using partial correlation coefficients". Physica A, 462, pp. 410–420 (2016) 黃士展 Aug. 30
Darya Frolova, Helman Stern, and Sigal Berman. "Most Probable Longest Common Subsequence for Recognition of Gesture Character Input". IEEE TRANSACTIONS ON CYBERNETICS, VOL. 43, NO. 3, JUNE 2013 羅崇軒 Aug. 30
Yiming Yang, J. Pedersen. "A Comparative Study on Feature Selection in Text Categorization". Proceedings of the International Conference on Machine Learning (ICML’97), 1997, pp. 412-420 賴駿豪 Aug. 30
. "Automated flower classification over a large number of classes". 傅威皓 Sept. 06
Alexander Tiskin. "Semi-local longest common subsequences in subquadratic time". Journal of Discrete Algorithms, Volume 6, Issue 4, December 2008, pp. 70–581 林必祥 Sept. 13
Abduliah N. Arslan and Omer Egecioglu. "Algorithms for the Constrained Longest Common Subsequence Problems". International Journal of Foundations of Computer Science Vol. 16, No. 6, pp. 1099-1109 (2005) 洪祥懷 Sept. 13
DROR Y. KENETT, XUQING HUANG, IRENA VODENSKA, SHLOMO HAVLIN and H. EUGENE STANLEY. "Partial correlation analysis : application for financial markets". Quantitative Finance, Vol. 15, No. 4, pp. 569-578 (2015) 黃士展 Sept. 21
Yoon Kim. "Convolutional Neural Networks for Sentence Classification". Proceedings of the 2014 Conference on Empirical Methods in Natural Language Processing(EMNLP), pp. 1746–1751 (2014) 賴駿豪 Sept. 21
M.E. Dyer, A.M. Frieze. "Planar 3DM Is NP-Complete". Journal of Algorithms, Vol.7, pp.174-184 (1986) 邱宣宗 Sept. 21
Chotirat Ann Ratanamahatana, Eamonn Keogh. " Making Time-series Classification more accurate Using Learned Constraints". Society for Industry and Applied Mathematics(SIAM) International Conference On Data Mining (2004) 洪書凱 Oct. 05
M. Calonder, V. Lepetit, C. Strecha, and P. Fua.. "BRIEF: Binary Robust Independent Elementary Features". Computer Vision - ECCV 2010, 11th European Conference on Computer Vision, Heraklion, Crete, Greece, September, 2010 傅威皓 Oct. 05
AHM Mahfuzur Rahman, M. Sohel Rahman. "Effective Sparse Dynamic Programming Algorithms for Merged and Block Merged LCS Problems". JOURNAL OF COMPUTERS, VOL. 9, NO. 8, AUGUST 2014 羅崇軒 Oct. 11
Sergey K. Aityana, Alexey K. Ivanov-Schitz, Sergey S. Izotov. "Time-shift asymmetric correlation analysis of global stock markets". Journal of International Financial Markets, Institutions & Money 20, pp. 590–605 (2010) 黃士展 Oct. 11
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Gabriella Csurka, Christopher R. Dance, Lixin Fan, Jutta Willamowski, Cédric Bray. "Visual Categorization with Bags of Keypoints". Workshop on Statistical Learning in Computer Vision, ECCV, France, 2004 留嘉鴻 Oct. 25
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Michael A. Bender and Martin Farach-Colton. "The LCA Problem Revisited". LATIN Proceedings of the 4th Latin American Symposium on Theoretical Informatics, pp. 88-94 (2000) 林必祥 Oct. 25
Sebastian Deorowicz. "Quadratic-time Algorithm for a String Constrained LCS Problem". Information Processing Letters Vol. 112, pp. 423-426 (2012) 洪祥懷 Nov. 08
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Andrew McCallum , Kamal Nigam. "A Comparison of Event Models for Naïve Bayes Text Classification". In AAAI-98 Workshop on Learning for Text Categorization, pp. 41–48 (1998) 賴駿豪 Nov. 08
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Mit Shah, Josif Grabocka, Nicolas Schilling, Martin Wistuba, Lars Schmidt-Thieme. "Learning DTW-Shapelets for Time-Series Classification". Proceedings of the 3rd IKDD Conference on Data Science (2016) 洪書凱 Nov. 15
William Leigh, Naval Modani, Russell Purvisc, Tom Roberts. "Stock market trading rule discovery using technical charting heuristics". Expert Systems with Applications 23 (2002), pp. 155-159 黃士展 Nov. 15
Francis Y.L. Chin, Alfredo De Santis, Anna Lisa Ferrara, N.L. Ho, S.K. Kim. "A simple algorithm for the constrained sequence problems". Information Processing Letters 90, pp. 175-179 (2004) 洪修傑 Nov. 22
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Yong Zhu, Tieniu Tan and Yunhong Wang. "Biometric Personal Identification Based on Handwriting". Proceedings of 15th International Conference on Pattern Recognition, Barcelona, Spain, September 3-7, 2000 陳柏憲 Nov. 29
Ethan Rublee, Vincent Rabaud, Kurt Konolige, Gary Bradski. "ORB: an efficient alternative to SIFT or SURF". IEEE International Conference on Computer Vision, Barcelona, Spain, 2011 傅威皓 Nov. 29
Edward Rosten and Tom Drummond. "Machine learning for high-speed corner detection". 9th European Conference on Computer Vision Graz, Austria May 7 - 13, 2006 留嘉鴻 Dec.15
Kevin Charter, Jonathan Schaeffer, Duane Szafron. "Sequence alignment using FastLSA". Proceedings of the 2000 International Conference on Mathematics and Engineering Techniques in Medicine and Biological Sciences, Las Vegas, Nevada, 2000, pp.239-245 林必祥 Dec.15
Elzbieta PeRkalska, Robert P.W. Duin, Pavel Paclik. "Prototype selection for dissimilarity-based classifiers". Pattern Recognition 39 (2006), pp. 189-208 洪書凱 Dec.15
Thomas G. Dietterich. "Ensemble Methods in Machine Learning". In Proceedings of the 1st International Workshop on Multiple Classifier Systems (MCS), 1-15, Cagliari, Italy, 2000. 賴駿豪 Dec.22
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Anelia Angelova, Shenghuo Zhu. "Efficient object detection and segmentation for fine-grained recognition". IEEE Conference on Computer Vision and Pattern Recognition, Oregon, USA, 2013 傅威皓 Dec.27
Claus Rick. "Simple and fast linear space computation of longest common subsequences". Information Processing Letters Volume 75, Issue 6, 30 November 2000, Pages 275-281 羅崇軒 Dec.27
Ahmad Kazem, Ebrahim Sharifi, Farookh Khadeer Hussain, Morteza Saberi, Omar Khadeer Hussain. "Support vector regression with chaos-based firefly algorithm for stock market price forecasting". Applied Soft Computing 13 (2013) 947–958 黃士展 Dec.27
         

 

1998 1999 2000 2001 2002 2003 2004 2005 2006 2007 2008 2009 2010 2011 2012 2013 2014 2015 2016 2017 2018